Title :
Executing parallel logical operations with DNA
Author :
Ogihara, Mitsunori ; Ray, Animesh
Author_Institution :
Dept. of Comput. Sci., Rochester Univ., NY, USA
Abstract :
DNA computation investigates the potential of DNA as a massively parallel computing device. Research is focused on designing parallel computation models executable by DNA based chemical processes and on developing algorithms in the models. L. Adleman (1994) initiated this area of research by presenting a DNA based method for solving the Hamilton Path Problem. That contribution raised the hope that parallel computation by DNA could be used to tackle NP-complete problems which are thought of as intractable. The current realization however, is that NP-complete problems may not be best suited for DNA based (more generally, molecule based) computing. A better subject for DNA computing could be large scale evaluation of parallel computation models. Several proposals have been made in this direction. We overview those methods, discuss technical and theoretical issues involved, and present some possible applications of those methods
Keywords :
biocomputing; computational complexity; parallel architectures; DNA based chemical processes; DNA based method; DNA computation; DNA computing; Hamilton Path Problem; NP-complete problems; intractable; massively parallel computing device; molecule based computing; parallel computation models; parallel logical operations; Algorithm design and analysis; Biology computing; Computational modeling; Computer science; Concurrent computing; DNA computing; NP-complete problem; Parallel processing; Polymers; Sequences;
Conference_Titel :
Evolutionary Computation, 1999. CEC 99. Proceedings of the 1999 Congress on
Conference_Location :
Washington, DC
Print_ISBN :
0-7803-5536-9
DOI :
10.1109/CEC.1999.782528