Title :
What scientific applications can benefit from hardware transactional memory?
Author :
Schindewolf, M. ; Biliari, B. ; Gyllenhaal, J. ; Schulz, Markus ; Wang, Aiping ; Karl, William Clem
Abstract :
Achieving efficient and correct synchronization of multiple threads is a difficult and error-prone task at small scale and, as we march towards extreme scale computing, will be even more challenging when the resulting application is supposed to utilize millions of cores efficiently. Transactional Memory (TM) is a promising technique to ease the burden on the programmer, but only recently has become available on commercial hardware in the new Blue Gene/Q system and hence the real benefit for realistic applications has not been studied yet. This paper presents the first performance results of TM embedded into OpenMP on a prototype system of BG/Q and characterizes code properties that will likely lead to benefits when augmented with TM primitives. We first study the influence of thread count, environment variables and memory layout on TM performance and identify code properties that will yield performance gains with TM. Second, we evaluate the combination of OpenMP with multiple synchronization primitives on top of MPI to determine suitable task to thread ratios per node. Finally, we condense our findings into a set of best practices. These are applied to a Monte Carlo Benchmark and a Smoothed Particle Hydrodynamics method. In both cases an optimized TM version, executed with 64 threads on one node, outperforms a simple TM implementation. MCB with optimized TM yields a speedup of 27.45 over baseline.
Keywords :
Monte Carlo methods; application program interfaces; distributed memory systems; hydrodynamics; mathematics computing; mechanical engineering computing; message passing; multi-threading; multiprocessing systems; synchronisation; Blue Gene-Q system; MPI; Monte Carlo benchmark; OpenMP; TM performance; TM primitive; TM technique; code property; environment variable; extreme scale computing; hardware transactional memory; memory layout; message passing interface; multiple thread synchronization; scientific application; smoothed particle hydrodynamics method; synchronization primitive; thread count; Benchmark testing; Computer architecture; Hardware; Instruction sets; Runtime; Synchronization;
Conference_Titel :
High Performance Computing, Networking, Storage and Analysis (SC), 2012 International Conference for
Conference_Location :
Salt Lake City, UT
Print_ISBN :
978-1-4673-0805-2
DOI :
10.1109/SC.2012.113