Title :
Bidomain modeling of cardiac tissue on a message-passing parallel computer
Author :
Shao, Jintao ; Ng, Kwong T.
Author_Institution :
Klipsch Sch. of Electr. & Comput. Eng., New Mexico State Univ., Las Cruces, NM, USA
Abstract :
Due to the complexity of the cardiac tissue´s dynamic properties, detailed multi-dimensional finite-difference bidomain modeling is computationally intensive and the model size is often limited by the computational power of a serial computer. We describe the use of a message-passing parallel computer to provide the memory and reduction in solution time for solving large finite-difference bidomain problems. Data distribution and inter-processor communication are achieved with the message-passing interface standard to ensure the portability of the computer code. Details on the parallel algorithms are presented together with some computational performance results
Keywords :
biology computing; cardiology; medical computing; message passing; parallel algorithms; physiological models; cardiac tissue´s dynamic properties; computational performance results; computational power; computer code; data distribution; detailed multi-dimensional finite-difference bidomain modeling; inter-processor communication; large finite-difference bidomain problems; memory; message-passing interface standard; message-passing parallel computer; model size; parallel algorithms; portability; serial computer; solution time; Arithmetic; Cardiac tissue; Communication networks; Communication standards; Concurrent computing; Electronic mail; Equations; Extracellular; Finite difference methods; Parallel algorithms;
Conference_Titel :
[Engineering in Medicine and Biology, 1999. 21st Annual Conference and the 1999 Annual Fall Meetring of the Biomedical Engineering Society] BMES/EMBS Conference, 1999. Proceedings of the First Joint
Conference_Location :
Atlanta, GA
Print_ISBN :
0-7803-5674-8
DOI :
10.1109/IEMBS.1999.802188