• DocumentCode
    347329
  • Title

    Identification of 1H-NMR spectra of N-linked oligosaccharides using artificial neural networks

  • Author

    Valafar, H. ; Valafar, Faramarz

  • Author_Institution
    Georgia Univ., Athens, GA, USA
  • Volume
    2
  • fYear
    1999
  • fDate
    36434
  • Abstract
    A standard multi-layered perceptron is employed to implement the task of identification of a group of oligosaccharides (N-linked oligosaccharides) based on their 1D nuclear magnetic resonance (1 H-NMR) spectra. The artificial neural network (ANN) was trained with 92 spectra representing 23 different compounds and tested with 23 other spectra (each compound represented once). This network achieved a classification rate of 100% during the training and testing phase while Bayesian classification applied to cluster distance measurements, produced a performance of less than 50%. A further advantage of the ANN identification routine is its insensitivity to instrument dependent variations of the spectra as long as the spectra are acquired at the correct field strength. This network is implemented on the world wide web for use by scientists around the world (http://www.ccrc.uga.edu)
  • Keywords
    Bayes methods; backpropagation; biological NMR; biology computing; feedforward neural nets; multilayer perceptrons; organic compounds; proteins; proton magnetic resonance; 1D nuclear magnetic resonance; 1H-NMR spectra; Bayesian classification; N-linked oligosaccharides; artificial neural networks; classification rate; cluster distance measurements; field strength; glycoproteins; http://www.ccrc.uga.edu; identification; instrument dependent variations; standard multi-layered perceptron; testing phase; training phase; world wide web; Artificial neural networks; Bayesian methods; Couplings; Distance measurement; Multilayer perceptrons; Nuclear magnetic resonance; Stability analysis; Statistical analysis; Testing; Web sites;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    [Engineering in Medicine and Biology, 1999. 21st Annual Conference and the 1999 Annual Fall Meetring of the Biomedical Engineering Society] BMES/EMBS Conference, 1999. Proceedings of the First Joint
  • Conference_Location
    Atlanta, GA
  • ISSN
    1094-687X
  • Print_ISBN
    0-7803-5674-8
  • Type

    conf

  • DOI
    10.1109/IEMBS.1999.804086
  • Filename
    804086