• DocumentCode
    3477469
  • Title

    MarSelHR: A Haplotype Reconstruction System Using Linkage Disequilibrium

  • Author

    Yeo, Sang-Soo ; Kim, Sung Kwon

  • Author_Institution
    Dept. of Comput. Sci. & Commun. Eng., Kyushu Univ., Fukuoka
  • fYear
    2007
  • fDate
    11-13 Oct. 2007
  • Firstpage
    75
  • Lastpage
    80
  • Abstract
    We propose MarSelHR, a haplotype reconstruction system, which is a combination of LD based block partitioning with Clark´s algorithm. MarSelHR uses less CPU processing time than other haplotype reconstruction systems, and makes possible large-scale data processing using less memory through block unit processing. Furthermore, MarSelHR involves biological meaning through LD based partitioning and is able to result in more precise inference.
  • Keywords
    biology computing; genetics; Marselarge-scale data processing LHR; block partitioning; haplotype reconstruction system; large-scale data processing; linkage disequilibrium; Biology computing; Costs; Couplings; Data processing; Humans; Inference algorithms; Information technology; Large-scale systems; Partitioning algorithms; Skin;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Frontiers in the Convergence of Bioscience and Information Technologies, 2007. FBIT 2007
  • Conference_Location
    Jeju City
  • Print_ISBN
    978-0-7695-2999-8
  • Type

    conf

  • DOI
    10.1109/FBIT.2007.142
  • Filename
    4524083
    • Link To Document
    https://search.isc.ac/dl/search/defaultta.aspx?DTC=49&DC=3477469