• DocumentCode
    3490890
  • Title

    Kinetics of muller´s ratchet from adaptive landscape viewpoint

  • Author

    Jiao, Shuyun ; Wang, Yanbo ; Yuan, Bo ; Ao, Ping

  • fYear
    2011
  • fDate
    2-4 Sept. 2011
  • Firstpage
    27
  • Lastpage
    32
  • Abstract
    Background: The accumulation of deleterious mutations of a population directly contributes to the fate as to how long the population would exist. Muller´s ratchet provides a quantitative framework to study the effect of accumulation. Adaptive landscape as a powerful concept in system biology provides a handle to describe complex and rare biological events. In this article we study the evolutionary process of a population exposed to Muller´s ratchet from the new viewpoint of adaptive landscape which allows us estimate the single click of the ratchet starting with an intuitive understanding. Methods: We describe how Wright-Fisher process maps to Muller´s ratchet. We analytically construct adaptive landscape from general diffusion equation. It shows that the construction is dynamical and the adaptive landscape is independent of the existence and normalization of the stationary distribution. We generalize the application of diffusion model from adaptive landscape viewpoint. Results: We develop a novel method to describe the dynamical behavior of the population exposed to Muller´s ratchet, and analytically derive the decaying time of the fittest class of populations as a mean first passage time. Most importantly, we describe the absorption phenomenon by adaptive landscape, where the stationary distribution is non-normalizable. These results suggest the method may be used to understand the mechanism of populations evolution and describe the biological processes quantitatively.
  • Keywords
    biodiffusion; cellular biophysics; genetics; physiological models; Mullers ratchet kinetics; Wright-Fisher process maps; absorption phenomenon; adaptive landscape; adaptive landscape viewpoint; biological processing; deleterious mutations; diffusion model; general diffusion equation; quantitative framework; stationary distribution; Adaptation models; Approximation methods; Educational institutions; Genetics; Mathematical model; Systems biology; Wright-Fisher process; adaptive landscape; mean first passage time; stationary distribution;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Systems Biology (ISB), 2011 IEEE International Conference on
  • Conference_Location
    Zhuhai
  • Print_ISBN
    978-1-4577-1661-4
  • Electronic_ISBN
    978-1-4577-1665-2
  • Type

    conf

  • DOI
    10.1109/ISB.2011.6033116
  • Filename
    6033116