• DocumentCode
    3496376
  • Title

    Transcriptome assembly and quantification from Ion Torrent RNA-Seq data

  • Author

    Mangul, Serghei ; Al Seesi, Sahar ; Mandoiu, Ion ; Caciula, Adrian ; Zelikovsky, Alex ; Brinza, Dumitru

  • Author_Institution
    Dept. of Comput. Sci., Univ. of California, Los Angeles, Los Angeles, CA, USA
  • fYear
    2013
  • fDate
    12-14 June 2013
  • Firstpage
    1
  • Lastpage
    1
  • Abstract
    We propose novel method for transcriptome reconstruction and quantitation of both known and novel transcripts from Ion Torrent RNA-Seq reads.
  • Keywords
    RNA; genomics; molecular biophysics; ion Torrent RNA-Seq data read; transcriptome assembly; transcriptome quantification; transcriptome reconstruction; Accuracy; Assembly; Bioinformatics; Computer science; Educational institutions; Electronic mail; Splicing;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Computational Advances in Bio and Medical Sciences (ICCABS), 2013 IEEE 3rd International Conference on
  • Conference_Location
    New Orleans, LA
  • Type

    conf

  • DOI
    10.1109/ICCABS.2013.6629235
  • Filename
    6629235
    • Link To Document
    https://search.isc.ac/dl/search/defaultta.aspx?DTC=49&DC=3496376