Title :
Characterizing morphology differences from image data using a modified fisher criterion
Author :
Wang, Wei ; Mo, Yilin ; Ozolek, John A. ; Rohde, Gustavo K.
Author_Institution :
Dept. of Biomed. Eng., Carnegie Mellon Univ., Pittsburgh, PA, USA
fDate :
March 30 2011-April 2 2011
Abstract :
Image-based morphometry of cells, tissues, and organs is an important topic in biomedical image analysis. We propose a novel method to characterize the morphological information that discriminates between two populations of morphological exemplars (cells, organs). We first demonstrate that the application of standard techniques such as Fisher linear discriminant analysis (FDA) can lead to undesirable errors in characterizing such information. We then describe an adaptation of the FDA technique that utilizes a least squares projection error to regularize the final solution. We show results comparing the FDA, modified FDA, and principal component analysis (PCA) techniques utilizing a contour-based characterization of both simulated and real images of cell nuclei.
Keywords :
biological organs; biological tissues; cellular biophysics; least squares approximations; medical image processing; principal component analysis; Fisher linear discriminant analysis; biological cells; biological organs; biological tissues; biomedical image analysis; cell nuclei; contour-based characterization; image data; image-based morphometry; least squares projection error; modified Fisher criterion; morphology differences; principal component analysis; Biological systems; Biomedical imaging; Equations; Mathematical model; Measurement; Principal component analysis; Shape; Data visualization; Fisher linear discriminant analysis; Morphological analysis;
Conference_Titel :
Biomedical Imaging: From Nano to Macro, 2011 IEEE International Symposium on
Conference_Location :
Chicago, IL
Print_ISBN :
978-1-4244-4127-3
Electronic_ISBN :
1945-7928
DOI :
10.1109/ISBI.2011.5872371