• DocumentCode
    3529022
  • Title

    Bayesian biclustering with the plaid model

  • Author

    Caldas, José ; Kaski, Samuel

  • Author_Institution
    Dept. of Inf. & Comput. Sci., Helsinki Univ. of Technol., Helsinki
  • fYear
    2008
  • fDate
    16-19 Oct. 2008
  • Firstpage
    291
  • Lastpage
    296
  • Abstract
    Biclustering is an active and promising research topic in unsupervised learning. With the aim of uncovering condition-specific similarities between objects, it may be applied in areas such as collaborative filtering and bioinformatics. The plaid model is amongst the most flexible biclustering models. However, its potential has not yet been fully explored. In this paper we extend the plaid model with a Bayesian framework and a collapsed Gibbs sampler. We show that the new method is useful in a gene expression study both in finding gene-specific associations between microarrays and condition-specific associations between genes.
  • Keywords
    Bayes methods; biology computing; genetics; pattern clustering; unsupervised learning; Bayesian biclustering; collapsed Gibbs sampler; gene expression analysis; plaid model; unsupervised learning; Bayesian methods; Clustering algorithms; Collaboration; Computer science; Filtering; Gene expression; Inference algorithms; Information technology; Motion pictures; Unsupervised learning;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Machine Learning for Signal Processing, 2008. MLSP 2008. IEEE Workshop on
  • Conference_Location
    Cancun
  • ISSN
    1551-2541
  • Print_ISBN
    978-1-4244-2375-0
  • Electronic_ISBN
    1551-2541
  • Type

    conf

  • DOI
    10.1109/MLSP.2008.4685495
  • Filename
    4685495