• DocumentCode
    3542449
  • Title

    A novel critical time analysis approach for genetic regulatory networks

  • Author

    Bhattacharya, Sonal ; Pal, Ranadip

  • Author_Institution
    Electr. & Comput. Engineeirng Dept., Texas Tech Univ., Lubbock, TX, USA
  • fYear
    2011
  • fDate
    4-6 Dec. 2011
  • Firstpage
    29
  • Lastpage
    32
  • Abstract
    The expression levels of certain molecular markers can show signs of the beginning of a disease. Effective treatment of the disease demands the identification of the time point when the probability of the corresponding genetic state reaches a critical value. This paper presents a new methodology which utilizes eigenvalue decomposition of the reaction matrix of the system that enables us to use efficient bisection method for finding the aforementioned critical time point. The results show significant improvement of computational efficiency over existing fine scale models based on Stochastic Master Equations.
  • Keywords
    diseases; eigenvalues and eigenfunctions; genetics; medical diagnostic computing; molecular biophysics; stochastic processes; bisection method; critical time analysis; disease; eigenvalue decomposition; genetic regulatory networks; reaction matrix; stochastic master equations; Computational modeling; Diseases; Eigenvalues and eigenfunctions; Equations; Genetics; Mathematical model; Vectors;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Genomic Signal Processing and Statistics (GENSIPS), 2011 IEEE International Workshop on
  • Conference_Location
    San Antonio, TX
  • ISSN
    2150-3001
  • Print_ISBN
    978-1-4673-0491-7
  • Electronic_ISBN
    2150-3001
  • Type

    conf

  • DOI
    10.1109/GENSiPS.2011.6169433
  • Filename
    6169433