DocumentCode
3598033
Title
ERICAs: Enabling insights into ab initio Molecular Dynamics simulations
Author
Hall, Kyle Wm ; Codorniu-Hernandez, Edelsys ; Kusalik, Peter G. ; Carpendale, Sheelagh
Author_Institution
Univ. of Calgary, Germany
fYear
2015
Firstpage
105
Lastpage
109
Abstract
We present Electronic & Radially-focused Instantaneous Coordinate Animations (ERICAs) as a visualization approach to represent the time evolution of the electronic structure data and nuclear coordinates resulting from ab initio Molecular Dynamics (AIMD) simulations. We developed ERICAs in order to enable chemists to analyze AIMD simulations of the interactions between two hydroxyl radicals in water. Consequently, we illustrate ERICAs using these simulations, and discuss how ERICAs can be generalized to other AIMD simulations. By using ERICAs, chemists have gained new insights into hydroxyl radical chemistry.
Keywords
chemistry computing; computer animation; data visualisation; molecular dynamics method; molecular electronic states; oxygen compounds; AIMD simulations; ERICA; Electronic-and-Radially-focused Instantaneous Coordinate Animations; ab-initio molecular dynamics simulations; electronic structure data; hydroxyl radical chemistry; nuclear coordinates; visualization approach; Atomic measurements; Chemicals; Data models; Data visualization; Hydrogen; Visualization; Water;
fLanguage
English
Publisher
ieee
Conference_Titel
Visualization Symposium (PacificVis), 2015 IEEE Pacific
Type
conf
DOI
10.1109/PACIFICVIS.2015.7156364
Filename
7156364
Link To Document