• DocumentCode
    3598033
  • Title

    ERICAs: Enabling insights into ab initio Molecular Dynamics simulations

  • Author

    Hall, Kyle Wm ; Codorniu-Hernandez, Edelsys ; Kusalik, Peter G. ; Carpendale, Sheelagh

  • Author_Institution
    Univ. of Calgary, Germany
  • fYear
    2015
  • Firstpage
    105
  • Lastpage
    109
  • Abstract
    We present Electronic & Radially-focused Instantaneous Coordinate Animations (ERICAs) as a visualization approach to represent the time evolution of the electronic structure data and nuclear coordinates resulting from ab initio Molecular Dynamics (AIMD) simulations. We developed ERICAs in order to enable chemists to analyze AIMD simulations of the interactions between two hydroxyl radicals in water. Consequently, we illustrate ERICAs using these simulations, and discuss how ERICAs can be generalized to other AIMD simulations. By using ERICAs, chemists have gained new insights into hydroxyl radical chemistry.
  • Keywords
    chemistry computing; computer animation; data visualisation; molecular dynamics method; molecular electronic states; oxygen compounds; AIMD simulations; ERICA; Electronic-and-Radially-focused Instantaneous Coordinate Animations; ab-initio molecular dynamics simulations; electronic structure data; hydroxyl radical chemistry; nuclear coordinates; visualization approach; Atomic measurements; Chemicals; Data models; Data visualization; Hydrogen; Visualization; Water;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Visualization Symposium (PacificVis), 2015 IEEE Pacific
  • Type

    conf

  • DOI
    10.1109/PACIFICVIS.2015.7156364
  • Filename
    7156364