Title :
Accurate Segmentation of Cervical Cytoplasm and Nuclei Based on Multiscale Convolutional Network and Graph Partitioning
Author :
Youyi Song ; Ling Zhang ; Siping Chen ; Dong Ni ; Baiying Lei ; Tianfu Wang
Author_Institution :
Shenzhen Univ., Shenzhen, China
Abstract :
In this paper, a multiscale convolutional network (MSCN) and graph-partitioning-based method is proposed for accurate segmentation of cervical cytoplasm and nuclei. Specifically, deep learning via the MSCN is explored to extract scale invariant features, and then, segment regions centered at each pixel. The coarse segmentation is refined by an automated graph partitioning method based on the pretrained feature. The texture, shape, and contextual information of the target objects are learned to localize the appearance of distinctive boundary, which is also explored to generate markers to split the touching nuclei. For further refinement of the segmentation, a coarse-to-fine nucleus segmentation framework is developed. The computational complexity of the segmentation is reduced by using superpixel instead of raw pixels. Extensive experimental results demonstrate that the proposed cervical nucleus cell segmentation delivers promising results and outperforms existing methods.
Keywords :
biomedical optical imaging; cancer; cellular biophysics; computational complexity; feature extraction; image segmentation; image texture; learning (artificial intelligence); medical image processing; MSCN; automated graph partitioning method; cervical cytoplasm segmentation; cervical nucleus cell segmentation; coarse segmentation; coarse-to-fine nucleus segmentation framework; computational complexity; contextual information; deep learning; multiscale convolutional network; pretrained feature; raw pixels; scale invariant feature extraction; shape information; superpixel; target objects; texture information; Computer architecture; Feature extraction; Image color analysis; Image edge detection; Image segmentation; Microprocessors; Shape; Cervical segmentation; coarse to fine; graph partitioning; graph-partitioning; multi-scale convolutional network; multiscale convolutional network (MSCN); touching-cell splitting;
Journal_Title :
Biomedical Engineering, IEEE Transactions on
DOI :
10.1109/TBME.2015.2430895