• DocumentCode
    3622372
  • Title

    Adaptive Multiresolution Techniques for Subcellular Protein Location Classification

  • Author

    G. Srinivasa;T. Merryman;A. Chebira;J. Kovacevic;A. Mintos

  • Author_Institution
    Dept. of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, PA.
  • Volume
    5
  • fYear
    2006
  • fDate
    6/28/1905 12:00:00 AM
  • Abstract
    We propose an adaptive multiresolution (MR) approach for classification of fluorescence microscopy images of subcellular protein locations, providing biologically relevant information. These images have highly localized features both in space and frequency which naturally leads us to MR tools. Moreover, as the goal of the classification system is to distinguish between various protein classes, we aim for features adapted to individual proteins. These two requirements further lead us to adaptive MR tools. We start with a simple classification system consisting of Haralick texture feature computation followed by a maximum-likelihood classifier, and demonstrate that, by adding an MR block in front, we are able to raise the average classification accuracy by roughly 10%. We conclude that selecting features in MR subspaces allows us to custom-build discriminative feature sets for fluorescence microscopy images of protein subcellular location images
  • Keywords
    "Protein engineering","Microscopy","Signal design","Biomedical engineering","Fluorescence","Frequency","Pattern classification","Testing","Proteomics","Biology computing"
  • Publisher
    ieee
  • Conference_Titel
    Acoustics, Speech and Signal Processing, 2006. ICASSP 2006 Proceedings. 2006 IEEE International Conference on
  • ISSN
    1520-6149
  • Print_ISBN
    1-4244-0469-X
  • Electronic_ISBN
    2379-190X
  • Type

    conf

  • DOI
    10.1109/ICASSP.2006.1661491
  • Filename
    1661491