DocumentCode
3622372
Title
Adaptive Multiresolution Techniques for Subcellular Protein Location Classification
Author
G. Srinivasa;T. Merryman;A. Chebira;J. Kovacevic;A. Mintos
Author_Institution
Dept. of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, PA.
Volume
5
fYear
2006
fDate
6/28/1905 12:00:00 AM
Abstract
We propose an adaptive multiresolution (MR) approach for classification of fluorescence microscopy images of subcellular protein locations, providing biologically relevant information. These images have highly localized features both in space and frequency which naturally leads us to MR tools. Moreover, as the goal of the classification system is to distinguish between various protein classes, we aim for features adapted to individual proteins. These two requirements further lead us to adaptive MR tools. We start with a simple classification system consisting of Haralick texture feature computation followed by a maximum-likelihood classifier, and demonstrate that, by adding an MR block in front, we are able to raise the average classification accuracy by roughly 10%. We conclude that selecting features in MR subspaces allows us to custom-build discriminative feature sets for fluorescence microscopy images of protein subcellular location images
Keywords
"Protein engineering","Microscopy","Signal design","Biomedical engineering","Fluorescence","Frequency","Pattern classification","Testing","Proteomics","Biology computing"
Publisher
ieee
Conference_Titel
Acoustics, Speech and Signal Processing, 2006. ICASSP 2006 Proceedings. 2006 IEEE International Conference on
ISSN
1520-6149
Print_ISBN
1-4244-0469-X
Electronic_ISBN
2379-190X
Type
conf
DOI
10.1109/ICASSP.2006.1661491
Filename
1661491
Link To Document