Title :
Two Lower Bounds for Self-Assemblies at Temperature 1
Author :
Jan Manuch;Ladislav Stacho;Christine Stoll
Author_Institution :
Sch. of Comput. Sci., Simon Fraser Univ., Burnaby, BC, Canada
fDate :
6/1/2009 12:00:00 AM
Abstract :
Using the Tile Assembly Model proposed by Rothemund and Winfree, we give two lower bounds on the minimum number of tile types needed to uniquely assemble a shape at temperature 1 under a natural assumption that there are no binding domain mismatches (any two adjacent tiles either form a bond or else both touching sides of the tiles are without glues). Rothemund and Winfree showed that uniquely assembling a full N times N square (a square where there is a bond between any two adjacent tiles) at temperature 1 requires N2 distinct tile types, and conjectured that the minimum number of tile types needed to self-assemble an N times N square (not a full square) is 2N - 1. Our lower bounds imply that a tile system that uniquely assembles an N times N square without binding domains mismatches, requires at least 2N - 1 tile types.
Keywords :
"Tiles","Bonding","Assembly systems","Self-assembly","Mathematics","DNA computing","Temperature measurement","Shape measurement","Mathematical model","Crystals"
Conference_Titel :
Bioinformatics and Biomedical Engineering , 2009. ICBBE 2009. 3rd International Conference on
Print_ISBN :
978-1-4244-2901-1
Electronic_ISBN :
2151-7622
DOI :
10.1109/ICBBE.2009.5163719