• DocumentCode
    3714400
  • Title

    Guilt-by association approach to identify novel human aging-related genes using protein domains

  • Author

    Jasjit K Banwait;Schuyler P Dougherty;Ishwor Thapa;Dhundy K Bastola

  • Author_Institution
    College of Information Science and Technology, University of Nebraska at Omaha, USA
  • fYear
    2015
  • Firstpage
    301
  • Lastpage
    304
  • Abstract
    Elucidating the genetic reasons associated with aging and longevity could greatly help in designing strategies to extend years of healthy life in humans. Extensive studies have been carried out in model organisms to find the effect of genes on aging. Understandably, human aging is difficult to research due to the complexity of the processes involved in aging, along with the time and ethical constraints associated with the human life. In spite of these constraints, the Human Ageing Genomic Resources (HAGR) has compiled the GenAge database, a curated list of aging related genes in humans and model organisms using information from published literature. We hypothesized that biological feature-based data mining approaches can overcome the existing limitations associated with human aging research. In this study we develop a computational method to identify aging related human genes that may play a potential role in aging and life span related processes. We employed protein domain information and guilt-by association approach to predict potential aging related genes, which resulted into the identification of twenty-seven novel human aging related genes.
  • Keywords
    "Proteins","Bioinformatics","Aging","Organisms","Genetics","IEEE 1394 Standard"
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Biomedicine (BIBM), 2015 IEEE International Conference on
  • Type

    conf

  • DOI
    10.1109/BIBM.2015.7359698
  • Filename
    7359698