• DocumentCode
    40953
  • Title

    Identifying the Most Connected Vertices in Hidden Bipartite Graphs Using Group Testing

  • Author

    Jianguo Wang ; Lo, Eric ; Yiu, Man Lung

  • Author_Institution
    Dept. of Comput., Hong Kong Polytech. Univ., Kowloon, China
  • Volume
    25
  • Issue
    10
  • fYear
    2013
  • fDate
    Oct. 2013
  • Firstpage
    2245
  • Lastpage
    2256
  • Abstract
    A graph is called hidden if the edges are not explicitly given and edge probe tests are required to detect the presence of edges. This paper studies the k most connected vertices (kMCV) problem on hidden bipartite graphs, which has applications in spatial databases, graph databases, and bioinformatics. There is a prior work on the kMCV problem, which is based on the “2-vertex testing” model, i.e., an edge probe test can only reveal the existence of an edge between two individual vertices. We study the kMCV problem, in the context of a more general edge probe test model called “group testing.” A group test can reveal whether there exists some edge between a vertex and a group of vertices. If group testing is used properly, a single invocation of a group test can reveal as much information as multiple invocations of 2-vertex tests. We discuss the cases and applications where group testing could be used, and present an algorithm, namely, GMCV, that adaptively leverages group testing to solve the kMCV problem.
  • Keywords
    graph theory; 2-vertex testing model; GMCV; bioinformatics; connected vertices; edge probe tests; graph databases; group testing; hidden bipartite graphs; k most connected vertices problem; kMCV problem; spatial databases; Bioinformatics; Bipartite graph; Image edge detection; Probes; Proteins; Switches; Testing; Bioinformatics; Bipartite graph; Image edge detection; Probes; Proteins; Query processing; Switches; Testing; graphs and networks;
  • fLanguage
    English
  • Journal_Title
    Knowledge and Data Engineering, IEEE Transactions on
  • Publisher
    ieee
  • ISSN
    1041-4347
  • Type

    jour

  • DOI
    10.1109/TKDE.2012.178
  • Filename
    6298889