Title :
MD application to protein and visualizing the function
Author :
Komata, Yuuki A. ; Ishimura, Kosei ; Wada, Mitsuo
Author_Institution :
Chaotic Syst. Eng. Lab., Hokkaido Univ., Sapporo, Japan
Abstract :
Nowadays, molecular dynamics simulation is prosperously applied to many kinds of biomolecules including proteins. We applied long time MD to proteins called HU and TF1, with relatively simple function, DNA-binding. Trajectories of simulation were analyzed to know their work in the organism. The relationships between protein motions and function were investigated.
Keywords :
DNA; biology computing; cellular transport; molecular biophysics; molecular dynamics method; proteins; DNA-binding; HU protein; MD application; TF1 protein; molecular dynamics simulation; protein motions;
Conference_Titel :
SICE 2003 Annual Conference
Conference_Location :
Fukui, Japan
Print_ISBN :
0-7803-8352-4
