• DocumentCode
    4284
  • Title

    A Method for Mining Infrequent Causal Associations and Its Application in Finding Adverse Drug Reaction Signal Pairs

  • Author

    Yanqing Ji ; Hao Ying ; Tran, Jimmy ; Dews, Peter ; Mansour, Ayman ; Massanari, R. Michael

  • Author_Institution
    Dept. of Electr. & Comput. Eng., Gonzaga Univ., Spokane, WA, USA
  • Volume
    25
  • Issue
    4
  • fYear
    2013
  • fDate
    Apr-13
  • Firstpage
    721
  • Lastpage
    733
  • Abstract
    In many real-world applications, it is important to mine causal relationships where an event or event pattern causes certain outcomes with low probability. Discovering this kind of causal relationships can help us prevent or correct negative outcomes caused by their antecedents. In this paper, we propose an innovative data mining framework and apply it to mine potential causal associations in electronic patient data sets where the drug-related events of interest occur infrequently. Specifically, we created a novel interestingness measure, exclusive causal-leverage, based on a computational, fuzzy recognition-primed decision (RPD) model that we previously developed. On the basis of this new measure, a data mining algorithm was developed to mine the causal relationship between drugs and their associated adverse drug reactions (ADRs). The algorithm was tested on real patient data retrieved from the Veterans Affairs Medical Center in Detroit, Michigan. The retrieved data included 16,206 patients (15,605 male, 601 female). The exclusive causal-leverage was employed to rank the potential causal associations between each of the three selected drugs (i.e., enalapril, pravastatin, and rosuvastatin) and 3,954 recorded symptoms, each of which corresponded to a potential ADR. The top 10 drug-symptom pairs for each drug were evaluated by the physicians on our project team. The numbers of symptoms considered as likely real ADRs for enalapril, pravastatin, and rosuvastatin were 8, 7, and 6, respectively. These preliminary results indicate the usefulness of our method in finding potential ADR signal pairs for further analysis (e.g., epidemiology study) and investigation (e.g., case review) by drug safety professionals.
  • Keywords
    data mining; drugs; fuzzy set theory; information retrieval; medical information systems; ADR; Veterans Affairs Medical Center; adverse drug reaction; adverse drug reaction signal; causal relationship discovery; computational model; drug related event; drug safety; electronic patient data set; exclusive causal leverage; fuzzy RPD model; infrequent causal association mining; innovative data mining; patient data retrieval; potential causal association rank; recognition primed decision model; symptoms; Computational modeling; Data mining; Databases; Drugs; Hidden Markov models; Marine vehicles; Adverse drug reactions; association rules; data mining algorithms; interestingness measure; recognition primed decision model;
  • fLanguage
    English
  • Journal_Title
    Knowledge and Data Engineering, IEEE Transactions on
  • Publisher
    ieee
  • ISSN
    1041-4347
  • Type

    jour

  • DOI
    10.1109/TKDE.2012.28
  • Filename
    6152107