Title :
Multifractal and R/S Analysis of Protein Structure
Author :
Tingting, Zheng ; Jiaxing, Cheng ; Junjun, Mao ; Jie, Song
Author_Institution :
Anhui Univ., Hefei
fDate :
July 30 2007-Aug. 1 2007
Abstract :
The spacing distance of amino acids is used to study the relationship between the primary structure and structural classification of large proteins. Rescaled-range (R/S) analysis was adopted to examine long-range correlation property of proteins. And multifractal property is then discussed by the spacing distance of amino acids. A classification of proteins by assigning to each sequence a point in two-dimensional space (Aa,H) is given to construct a phylogenetic tree. This result is shown to be reasonably satisfactory to alpha + beta class.
Keywords :
biology computing; fractals; molecular biophysics; proteins; R/S analysis; amino acid; large proteins; long-range correlation property; multifractal; phylogenetic tree; protein classification; protein structure; rescaled-range analysis; Amino acids; Artificial intelligence; Distributed computing; Fractals; Hidden Markov models; Mathematics; Proteins; Rivers; Sequences; Software engineering;
Conference_Titel :
Software Engineering, Artificial Intelligence, Networking, and Parallel/Distributed Computing, 2007. SNPD 2007. Eighth ACIS International Conference on
Conference_Location :
Qingdao
Print_ISBN :
978-0-7695-2909-7
DOI :
10.1109/SNPD.2007.238