• DocumentCode
    471948
  • Title

    Hybrid Automata as a Unifying Framework for Modeling Excitable Cells

  • Author

    Entcheva, P.Ye.E. ; Smolka, Scott A. ; True, M.R. ; Grosu, Radu

  • Author_Institution
    Comput. Sci. Dept., Stony Brook Univ., NY
  • fYear
    2006
  • fDate
    Aug. 30 2006-Sept. 3 2006
  • Firstpage
    4151
  • Lastpage
    4154
  • Abstract
    We propose hybrid automata (HA) as a unifying framework for computational models of excitable cells. HA, which combine discrete transition graphs with continuous dynamics, can be naturally used to obtain a piecewise, possibly linear, approximation of a nonlinear excitable-cell model. We first show how HA can be used to efficiently capture the action-potential morphology-as well as reproduce typical excitable-cell characteristics such as refractoriness and restitution-of the dynamic Luo-Rudy model of a guinea-pig ventricular myocyte. We then recast two well-known computational models, Biktashev´s and Fenton-Karma, as HA without any loss of expressiveness. Given that HA possess an intuitive graphical representation and are supported by a rich mathematical theory and numerous analysis tools, we argue that they are well positioned as a computational model for biological processes
  • Keywords
    automata theory; bioelectric potentials; biomembrane transport; cardiology; graph theory; medical computing; muscle; physiological models; piecewise linear techniques; Luo-Rudy dynamic model; action-potential morphology; biological processes; computational cell model; discrete transition graphs; excitable cell modeling; excitable-cell characteristics; guinea-pig ventricular myocyte; hybrid automata; intuitive graphical representation; piecewise linear approximation; Automata; Biological system modeling; Biology computing; Computational modeling; Switches; Temperature; Thermal variables control; Thermostats; USA Councils; Vehicle dynamics;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Engineering in Medicine and Biology Society, 2006. EMBS '06. 28th Annual International Conference of the IEEE
  • Conference_Location
    New York, NY
  • ISSN
    1557-170X
  • Print_ISBN
    1-4244-0032-5
  • Electronic_ISBN
    1557-170X
  • Type

    conf

  • DOI
    10.1109/IEMBS.2006.259294
  • Filename
    4462715