• DocumentCode
    478322
  • Title

    A Novel Classification Algorithm of Thermostable Proteins by Using Hurst Exponent and SVM Classifier

  • Author

    Liu, Hsiang-chuan ; Chang, Horngjinh ; Lee, Kuei-jen ; Shieh, Jiunn-i ; Huang, Wen-chun ; Huang, Shin-Ming

  • Author_Institution
    Dept. of Bioinf., Asia Univ., Taichung
  • Volume
    5
  • fYear
    2008
  • fDate
    18-20 Oct. 2008
  • Firstpage
    24
  • Lastpage
    28
  • Abstract
    In search of good classification algorithm of thermostable proteins is an important issue. In this paper, a novel classification algorithm of thermostable proteins by using Hurst exponent and SVM classifier is proposed. This method not used before is the first one integrating the physics chemistry properties, fractal property and support vector machine (SVM) classifier. For evaluating the performance of this new algorithm, a real data experiment by using 5 fold and leave-one-out cross-validation accuracy is conducted. Experimental result shows that this new classification algorithm is feasible and useful.
  • Keywords
    biology computing; pattern classification; proteins; support vector machines; thermal stability; Hurst exponent; SVM classifier; classification algorithm; fractal property; leave-one-out cross-validation accuracy; physics chemistry properties; support vector machine classifier; thermostable proteins; Asia; Bioinformatics; Chemistry; Classification algorithms; Fractals; Physics; Proteins; Psychology; Support vector machine classification; Support vector machines; Hurst Exponent; SVM Classifier; Thermostable Proteins;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Natural Computation, 2008. ICNC '08. Fourth International Conference on
  • Conference_Location
    Jinan
  • Print_ISBN
    978-0-7695-3304-9
  • Type

    conf

  • DOI
    10.1109/ICNC.2008.852
  • Filename
    4667389