DocumentCode :
495323
Title :
Classfication and Evolution of HLH Family Members in Poultry Genome
Author :
Han, Chunchun ; Wang, Wei ; Wang, Jiwen ; Li, Liang
Author_Institution :
Key Lab. of Animal Genetic Resources, Sichuan Agric. Univ., Ya´´an, China
Volume :
6
fYear :
2009
fDate :
March 31 2009-April 2 2009
Firstpage :
301
Lastpage :
306
Abstract :
Based on the amino acid sequence of bHLH-zip motif in SREBP-1 and SREBP-2 in Landes goose obtained by gene cloning, the sequences of HLH family members in poultry genome were screened in the Protein Databases of NCBI. The classification and evolution of HLH protein family in poultry genome were analyzed. HLH protein family in poultry genome are divided into five groups (A, B, C, D and E) according to the sequence features of bHLH domain. The result of phylogenetic development indicates the sequences of HLH family members in poultry genome also gather into five groups, and this grouping is generally consistent with the classification by sequence features. Group B diverges from other groups firstly, and the divergent time of group A is the latest. Groups A and D have closer genetic relationship, and groups C and E have closer phylogenetic relationship.
Keywords :
data analysis; farming; genetics; proteins; HLH family members; HLH protein family; Landes goose; SREBP-1; SREBP-2; amino acid sequence; bHLH-zip motif; gene cloning; phylogenetic development; phylogenetic relationship; poultry genome; protein databases; sequence features; Animals; Bioinformatics; Cloning; Genetics; Genomics; Humans; Phylogeny; Proteins; Sequences; Spatial databases; Classfication; Evolution; Key words: HLH; Poultry genome;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Computer Science and Information Engineering, 2009 WRI World Congress on
Conference_Location :
Los Angeles, CA
Print_ISBN :
978-0-7695-3507-4
Type :
conf
DOI :
10.1109/CSIE.2009.33
Filename :
5170709
Link To Document :
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