Title :
Spectral Methods for Cancer Classification Using Microarray Data
Author_Institution :
Dept. of Comput. Sci. & Eng., Sogang Univ., Seoul, South Korea
Abstract :
In this paper, we present a novel method based on spectral bipartitioning, traditionally used for finding min-cuts in graphs, for classification of cancer using microarray data. Our method is applied to five publicly available datasets of acute leukemia, colon cancer, ovarian cancer, prostate cancer and diffuse large B-cell lymphoma, and is shown to have classification accuracy comparable to that of some of the currently known best classification methods for microarray data.
Keywords :
cancer; cellular biophysics; genetics; graph theory; medical computing; pattern classification; tumours; B-cell lymphoma; acute leukemia; cancer classification; colon cancer; gene expression; microarray data; ovarian cancer; prostate cancer; spectral graph bipartitioning method; Biological cells; Classification algorithms; Colon; Computer science; Current measurement; Data engineering; Linear discriminant analysis; Optimization methods; Prostate cancer; Throughput; Classification; Microarray Data; Spectral Bipartitioning;
Conference_Titel :
Computational Sciences and Optimization, 2009. CSO 2009. International Joint Conference on
Conference_Location :
Sanya, Hainan
Print_ISBN :
978-0-7695-3605-7
DOI :
10.1109/CSO.2009.389