DocumentCode :
505165
Title :
On the existence of oscillatory behavior in gene regulatory networks with cyclic interconnections
Author :
Hori, Yutaka ; Takabe, Akifumi ; Hara, Shinji
Author_Institution :
Dept. of Inf. Phys. & Comput., Univ. of Tokyo, Tokyo, Japan
fYear :
2009
fDate :
18-21 Aug. 2009
Firstpage :
2525
Lastpage :
2530
Abstract :
In this paper, we derive an existence condition of periodic oscillations in cyclic gene regulatory networks, of which the dynamical behavior is described by nonlinear differential equations. For this purpose, we first point out that change of the equilibrium point with respect to biochemical parameters is important for comprehensive analysis, and show the properties which the equilibrium point should satisfy. Then, by employing these properties, we derive an analytic condition for the existence of periodic oscillations in cyclic gene regulatory networks where genes have homogeneous dynamics. Compared to preceding studies, our condition has the following distinctive features: (i)it is analytically written only in terms of the system parameters, (ii)it is applicable for cyclic gene regulatory networks consisting of any number of genes. Thus, biological interpretation of the result is easily obtained, and, in fact, it is concluded that cyclic gene regulatory networks with homogeneous gene dynamics tend to have periodic oscillations as the number of genes gets large. Finally, we discuss the case of cyclic gene regulatory networks with heterogeneous gene dynamics.
Keywords :
biochemistry; cellular biophysics; genetics; molecular biophysics; nonlinear differential equations; biochemical parameters; comprehensive analysis; cyclic gene regulatory networks; cyclic interconnections; equilibrium point; heterogeneous gene dynamics; homogeneous dynamics; nonlinear differential equations; periodic oscillations; Biochemical analysis; Cells (biology); Computer networks; Differential equations; Electronic mail; Organisms; Physics computing; Proteins; Rhythm; Stability; cyclic interconnections; gene regulatory networks; oscillations;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
ICCAS-SICE, 2009
Conference_Location :
Fukuoka
Print_ISBN :
978-4-907764-34-0
Electronic_ISBN :
978-4-907764-33-3
Type :
conf
Filename :
5335339
Link To Document :
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