DocumentCode :
507960
Title :
A Proteome Characteristic Pattern of Unstable Angina was Found by Two-Dimensional Difference Gel Electrophoresis and Least Angle Regression
Author :
Zhao, Huihui ; Chen, Jianxin ; Hou, Na ; Lu, Weidong ; Wang, Wei
Author_Institution :
Beijing Univ. of Chinese Med., Beijing, China
Volume :
2
fYear :
2009
fDate :
14-16 Aug. 2009
Firstpage :
104
Lastpage :
108
Abstract :
Unstable angina is now a severe burden on society and family in both industrialized and developing countries, but the traditional related factors can not explain the whole situations and the traditional ¿golden indicator¿ for the diagnosis meet many new challenges. The aim of this study was to analyze the proteome characteristic pattern of unstable angina. Plasma samples were obtained from twelve unstable angina patients and twelve healthy volunteers. A polyclonal antibody affinity column was used to remove the six most abundant proteins. Then, the two classes of samples were separated by Two-dimensional difference gel electrophoresis (2D-DIGE). The differentially expressed protein spots were selected and identified with matrix-assisted laser desorption /ionization time-of-flight mass spectrometry (MALDI-TOF-MS) or MS-MS. In the end, using least angle regression algorithm, we studied the proteome characteristic pattern of unstable angina. The result is that, there are significant difference between unstable angina patients and healthy volunteers. The twenty-four proteins made pattern gain by least angle regression could distinguish unstable angina patients from the healthy people and it is probably the proteome characteristic pattern of unstable angina. To have a conclusion, the twenty-four proteins made pattern maybe the proteome characteristic pattern of unstable angina.
Keywords :
cardiology; data mining; electrophoresis; gels; medical computing; patient diagnosis; pattern classification; proteins; proteomics; regression analysis; time of flight mass spectra; 2D difference gel electrophoresis; differentially expressed protein spots; least angle regression algorithm; matrix-assisted laser desorption/ionization time-of-flight mass spectrometry; pattern gain; polyclonal antibody affinity column; proteins; proteome characteristic pattern; unstable angina; Electrokinetics; Fluorescence; Hospitals; Mass spectroscopy; Medical diagnostic imaging; Plasma applications; Plasma displays; Plasma properties; Proteins; Proteomics; characteristic pattern; data mining; least angle regression; plasma; proteomics; two-dimensional difference gel electrophoresis; unstable angina;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Natural Computation, 2009. ICNC '09. Fifth International Conference on
Conference_Location :
Tianjin
Print_ISBN :
978-0-7695-3736-8
Type :
conf
DOI :
10.1109/ICNC.2009.420
Filename :
5364240
Link To Document :
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