Title :
Analyser and viewer of protein inter-residue contacts
Author :
Bojovic, V. ; Skala, Karolj ; Grubisic, I.
Author_Institution :
Centre for Informatics and Computing, Ruđer Bošković Institute, Bijenička cesta 54, Zagreb, HR-10000, Croatia
Abstract :
This service is made in order to achieve more efficient insight into the nature of hydrophobic or hydrophilic forces in proteins. It enables to visualize details and specificity in contacts between amino acid residues in proteins. In addition, it is possible to visualize contributions of inter-residue contacts depending on selected physical and chemical properties of amino acid residues (current version is based on the hydrophobicity scale intoroduced by J. Kyte and R. F. Doolittle, J. Mol. Biol., vol. 157, p. 105–132, 1982).
Keywords :
Amino acids; Chemicals; Data visualization; Electronic mail; Informatics; Nuclear magnetic resonance; Proteins; Relational databases; Visual databases; Web server;
Conference_Titel :
MIPRO, 2010 Proceedings of the 33rd International Convention
Conference_Location :
Opatija, Croatia
Print_ISBN :
978-1-4244-7763-0