Title :
Notice of Retraction
An approach for metabonomics data analysis applied on the urine of RAC water extract administered rats
Author :
Guoliang Xu ; Qiyun Zhang ; Bingtao Li ; Xilan Tang ; Liping Huang ; Riyue Yu ; Hongning Liu
Author_Institution :
Key Lab. of Modern Preparation of TCM, Jiangxi Univ. of Traditional Chinese Med., Nanchang, China
Abstract :
Notice of Retraction
After careful and considered review of the content of this paper by a duly constituted expert committee, this paper has been found to be in violation of IEEE´s Publication Principles.
We hereby retract the content of this paper. Reasonable effort should be made to remove all past references to this paper.
The presenting author of this paper has the option to appeal this decision by contacting TPII@ieee.org.
Data sets resulting from metabonomics or metabolic profiling experiments are becoming increasingly complex, which is hard to summarize and virsualize without appropriate tools. The use of chemometric tools, such as OSC, PCA, PLS-DA, OPLS-DA make the data dimension and interpretation much easier. Here we showed a system method based on PCA, OSC-PLS-DA for metabonomic data analysis; Furthermore, S-plot, as a visualized tool was used for the biomarkers discovery. As an example, dataset from RAC water extract administrated rats urine collected by LC/MS/MS was used to demonstrate this method. As a result, S-plot based on OSC-PLS-DA was proved to be an effective, time saving tool for data interpretation and biomarkers discovery.
Keywords :
biology computing; data analysis; data visualisation; principal component analysis; OPLS-DA; OSC; PCA; PLS-DA; RAC water extract administered rats; biomarkers discovery; chemometric tools; data interpretation; metabolic profiling experiments; metabonomics data analysis; urine; visualized tool; World Wide Web; Coomans´ plot; Principal component analysis (PCA); orthogonal signal correction partial least square discrimant analysis (OSC-PLS-DA);
Conference_Titel :
Computer Application and System Modeling (ICCASM), 2010 International Conference on
Conference_Location :
Taiyuan
Print_ISBN :
978-1-4244-7235-2
DOI :
10.1109/ICCASM.2010.5619281