DocumentCode :
534659
Title :
Molecular cloning and characterization analysis of LEF-1 gene from Inner Mongolia Cashmere Goat
Author :
Zhang, Tao ; Zhigang Wang ; Bin Li ; Shi, Jiejun ; Qin, Yi ; Liu, Dongjun
Author_Institution :
Key Lab. of Mammal Reproductive Biol. & Biotechnol., Inner Mongolia Univ., Hohhot, China
Volume :
6
fYear :
2010
fDate :
16-18 Oct. 2010
Firstpage :
2574
Lastpage :
2577
Abstract :
LEF-1, lymphocyte enhancer-binding factor-1, is a member of the LEF-1/TCF (T cell-specific transcription factor) family of high mobility group (HMG) transcription factors. LEF-1/TCF is downstream of the Wnt/β-catenin signaling pathway. LEF-1 requires Wnt signaling and stabilized β-catenin to express the hair-specific keratin genes and control hair differentiation. Tcf3/LEF-1 complex has a key role in controlling skin stem cells differentiation. Thus this study amplified LEF-1 cDNA by RTPCR from Inner Mongolia Cashmere Goat (Capra hircus) to produce a transgenic goat with increased cashmere production. The molecular characterization of the LEF-1 gene was described. The amplified fragment is 1132bp (HM059927) in length, including an ORF of 1116 bp corresponding to a polypeptide of 371 amino acids residues with 41.2 kDa predicted molecular mass. The full cDNA nucleotide sequence has a 98% identity with bovine and 94% identity with transcript variant 2 of human. The amino acid sequence is 98% identical to the human isoform 2. Furthermore, a representative HMG-box and a β-catenin binding domain were predicted via the NCBI CDD (Conserved Domain Database). The goat LEF-1 gene cDNA was cloned and its molecular characterization was analyzed by bioinformatics. To our knowledge this is the first reported.
Keywords :
DNA; biochemistry; bioinformatics; bonds (chemical); cellular biophysics; genetics; molecular biophysics; proteins; β-catenin binding domain; Capra hircus; LEF-1 cDNA; LEF-1 gene; T cell-specific transcription factor; Wnt-β-catenin signaling pathway; amino acid residues; amino acid sequence; bioinformatics; bovine; cDNA nucleotide sequence; conserved domain database; control hair differentiation; hair-specific keratin genes; high-mobility group transcription factors; human isoform 2; inner Mongolia cashmere goat; lymphocyte enhancer-binding factor-1; molecular characterization; molecular cloning; polypeptide; transgenic goat; Amino acids; Hair follicle; Humans; Phylogeny; Proteins; Skin; Bioinformation analysis; Gene cloning; Inner mongolia cashmere goat; LEF-1;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Biomedical Engineering and Informatics (BMEI), 2010 3rd International Conference on
Conference_Location :
Yantai
Print_ISBN :
978-1-4244-6495-1
Type :
conf
DOI :
10.1109/BMEI.2010.5639713
Filename :
5639713
Link To Document :
بازگشت