• DocumentCode
    535359
  • Title

    Restoring of single ion-channel current based on wavelet transform

  • Author

    Huang, Zhongchao ; Tan, Qiulin ; Gu, Liqun

  • Author_Institution
    Dept. of Biomed. Eng., Central South Univ., Changsha, China
  • Volume
    7
  • fYear
    2010
  • fDate
    16-18 Oct. 2010
  • Firstpage
    3229
  • Lastpage
    3233
  • Abstract
    Patch-clamp recordings or artificial planar bilayer recordings provide an effective mean for detailed kinetics studies at singular molecular level. The restoration or idealization into continuous dwell-time sequences of noisy single channel recordings is the essential fundamental of successive analysis. In term of the characteristics of step changes in data recording when switching between open and close states, we present a jump-edge detection method using specific wavelet based on its ability of singularity detection for determining the borders of open or closed events. Meanwhile, two important problems are in detail discussed including the threshold selection criterion and identification of min/max extreme point pairs. Applications to simulation and experiment data elucidate the performances and virtues of the proposed method.
  • Keywords
    bioelectric phenomena; biology computing; biomembrane transport; molecular biophysics; signal processing; wavelet transforms; continuous dwell-time sequences; jump-edge detection method; min-max extreme point pairs; noisy single channel recordings; single ion-channel current; singular molecular level; threshold selection criterion; wavelet transform; Data models; Filter bank; Fitting; Hidden Markov models; Kinetic theory; Wavelet transforms; extreme point pairs; idealization; single channel recording; singularity detection; wavelet transform;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Image and Signal Processing (CISP), 2010 3rd International Congress on
  • Conference_Location
    Yantai
  • Print_ISBN
    978-1-4244-6513-2
  • Type

    conf

  • DOI
    10.1109/CISP.2010.5647800
  • Filename
    5647800