• DocumentCode
    547208
  • Title

    The reconstruction of gene regulatory network based On Multi-Agent System by fusing multiple data sources

  • Author

    Yang, Tao ; Sun, Ying-Fei

  • Author_Institution
    Sch. of Inf. Sci. & Eng., Grad. Univ. of Chinese Acad. of Sci., Beijing, China
  • Volume
    2
  • fYear
    2011
  • fDate
    10-12 June 2011
  • Firstpage
    126
  • Lastpage
    130
  • Abstract
    Gene regulatory network (GRN) is a very important biological system during the cell cycle. In this case, the gene regulatory network reconstruction is an important and meaningful work. Based on the network, the future state of a cell can be predicted by the gene expression process. In this paper, we present a new method to reconstruct the network. During this method, we use Multi-Agent System (MAS) to fuse the gene expression data and TF binding data and generate an initial network. Based on the initial network, a final network is learned using Dynamic Bayesian Network (DBN) learning method. In order to verify the performance of our method, we experiment the method using the data of 25 genes and compare the result with the algorithms already raised in the previous papers. The comparing result show that the method based on MAS and DBN has a better performance than others.
  • Keywords
    Bayes methods; biology computing; genetics; multi-agent systems; DBN learning method; GRN; MAS; biological system; cell cycle; dynamic Bayesian network; gene regulatory network reconstruction; multiagent system; multiple data sources; Bayesian methods; Bioinformatics; Fuses; Gene expression; Intelligent agents; Multiagent systems; Reliability; Dynamic Bayesian Network; Gene Regulatory Network; Multi-Agent System; Multi-Classifier Fused;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Computer Science and Automation Engineering (CSAE), 2011 IEEE International Conference on
  • Conference_Location
    Shanghai
  • Print_ISBN
    978-1-4244-8727-1
  • Type

    conf

  • DOI
    10.1109/CSAE.2011.5952438
  • Filename
    5952438