DocumentCode :
547282
Title :
Efficient similarity search on massive gene data based on cloud computing
Author :
Wang, Zhiqiong ; Chen, Hao ; Huang, Yalu ; Xu, Yu ; Yang, Longwei ; Xiao, Jingjing
Author_Institution :
Sino-Dutch Biomed. & Inf. Eng. Sch., Northeastern Univ., Shenyang, China
Volume :
2
fYear :
2011
fDate :
10-12 June 2011
Firstpage :
702
Lastpage :
706
Abstract :
As biomedical data grows rapidly nowadays, we are going to study how to efficiently apply cloud computing into biomedical problem. In this paper, the process of solving biomedical problem based on cloud computing is presented. First, the biomedical issue would be focus on the gene match and generation of large amount of the emulated data from real data. Second, a mathematical model is proposed to describe the problem. Third, the mathematical model is implemented into our MapReduce model, which means simulating the biomedical application rested on cloud computing. Finally, some experiments are conducted to test the performance of cloud computing on this issue. Besides, at the end of the paper, some advices are given to doctors and biomedical scientists.
Keywords :
biology computing; cloud computing; mathematical analysis; MapReduce model; biomedical application; biomedical data; biomedical problem; biomedical scientists; cloud computing; doctors; emulated data; massive gene data; mathematical model; similarity search; Biological system modeling; Cloud computing; Computational modeling; Computers; Data models; Mathematical model; Medical services; Cloud computing; Gene; Massive data; Similarity;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Computer Science and Automation Engineering (CSAE), 2011 IEEE International Conference on
Conference_Location :
Shanghai
Print_ISBN :
978-1-4244-8727-1
Type :
conf
DOI :
10.1109/CSAE.2011.5952601
Filename :
5952601
Link To Document :
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