DocumentCode
550625
Title
Signal processing in stochastic biochemical systems with information theory
Author
Chen Aimin ; Wang Junwei
Author_Institution
Inst. of Appl. Math., Henan Univ., Kaifeng, China
fYear
2011
fDate
22-24 July 2011
Firstpage
5675
Lastpage
5679
Abstract
Biochemical networks can respond to temporal characteristics of time-varying signals. To understand how reliably biochemical networks can transmit information we must consider how an input signal as a function of time-the input trajectory-can be mapped onto an output trajectory. Here we estimate the instantaneous mutual information between input and output trajectories using a Gaussian model. By calculating the mutual information for instantaneous measurements of biochemical systems for a Gaussian model, we quantify the influence of the macroscopic elasticity of a transcriptional regulatory network on its ability to process environmental signals. we study the maximum mutual information between the input (chemical) signal and the output (genetic) response attainable by the network in the context of an analytic model of particle number fluctuations.
Keywords
Gaussian processes; biology computing; genetics; information theory; signal processing; Gaussian model; biochemical network; environmental signal; information theory; particle number fluctuation; signal processing; stochastic biochemical system; time-varying signal characteristics; transcriptional regulatory network; Biological system modeling; Correlation; Covariance matrix; Mutual information; Noise; Steady-state; Trajectory; Gaussian model; Instantaneous mutual information; Stochastic biological system;
fLanguage
English
Publisher
ieee
Conference_Titel
Control Conference (CCC), 2011 30th Chinese
Conference_Location
Yantai
ISSN
1934-1768
Print_ISBN
978-1-4577-0677-6
Electronic_ISBN
1934-1768
Type
conf
Filename
6000964
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