DocumentCode
564812
Title
An improved parallel minimum spanning tree based clustering algorithm for microarrays data analysis
Author
Elsayad, Dina ; Khalifa, Amal ; Khalifs, Mohammed Essam ; El-Horbaty, El-Sayed
Author_Institution
Fac. of Comput. & Inf. Sci., Ain Shams Univ., Cairo, Egypt
fYear
2012
fDate
14-16 May 2012
Abstract
Solving duster identification problem on large amount of data is known to be time consuming. Almost au the state of art clustering techniques focuses on sequential algorithms which suffer from me problem of long runtime. So, parallel algorithms are needed. One of the attempts is a parallel minimum spanning tree (MST)-based clustering technique, called CLUMP, which identifies dense clusters in a noisy background. Although, CLUMP is efficient algorithm for clustering large data set, the MST construction is considered the time consuming phase of the algorithm. This paper presents and improved CLUMP algorithm CLUMP to enhance its speed. The experimental results showed that the proposed algorithm proved to be efficient than the original algorithm CLUMP in terms of complexity and runtime.
Keywords
data analysis; parallel algorithms; pattern clustering; tree data structures; CLUMP; MST; dense clusters; duster identification problem; improved parallel minimum spanning tree based clustering algorithm; microarrays data analysis; noisy background; parallel algorithms; sequential algorithms; Algorithm design and analysis; Clustering algorithms; Computers; Data engineering; Data structures; Educational institutions; Informatics; Clustering; Microarrays; Minimum spanning tree; parallel;
fLanguage
English
Publisher
ieee
Conference_Titel
Informatics and Systems (INFOS), 2012 8th International Conference on
Conference_Location
Cairo
Print_ISBN
978-1-4673-0828-1
Type
conf
Filename
6236516
Link To Document