• DocumentCode
    564812
  • Title

    An improved parallel minimum spanning tree based clustering algorithm for microarrays data analysis

  • Author

    Elsayad, Dina ; Khalifa, Amal ; Khalifs, Mohammed Essam ; El-Horbaty, El-Sayed

  • Author_Institution
    Fac. of Comput. & Inf. Sci., Ain Shams Univ., Cairo, Egypt
  • fYear
    2012
  • fDate
    14-16 May 2012
  • Abstract
    Solving duster identification problem on large amount of data is known to be time consuming. Almost au the state of art clustering techniques focuses on sequential algorithms which suffer from me problem of long runtime. So, parallel algorithms are needed. One of the attempts is a parallel minimum spanning tree (MST)-based clustering technique, called CLUMP, which identifies dense clusters in a noisy background. Although, CLUMP is efficient algorithm for clustering large data set, the MST construction is considered the time consuming phase of the algorithm. This paper presents and improved CLUMP algorithm CLUMP to enhance its speed. The experimental results showed that the proposed algorithm proved to be efficient than the original algorithm CLUMP in terms of complexity and runtime.
  • Keywords
    data analysis; parallel algorithms; pattern clustering; tree data structures; CLUMP; MST; dense clusters; duster identification problem; improved parallel minimum spanning tree based clustering algorithm; microarrays data analysis; noisy background; parallel algorithms; sequential algorithms; Algorithm design and analysis; Clustering algorithms; Computers; Data engineering; Data structures; Educational institutions; Informatics; Clustering; Microarrays; Minimum spanning tree; parallel;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Informatics and Systems (INFOS), 2012 8th International Conference on
  • Conference_Location
    Cairo
  • Print_ISBN
    978-1-4673-0828-1
  • Type

    conf

  • Filename
    6236516