DocumentCode :
565104
Title :
Path scheduling on digital microfluidic biochips
Author :
Grissom, Daniel ; Brisk, Philip
Author_Institution :
Dept. of Comput. Sci. & Eng., Univ. of California, Riverside, CA, USA
fYear :
2012
fDate :
3-7 June 2012
Firstpage :
26
Lastpage :
35
Abstract :
Since the inception of digital microfluidics, the synthesis problems of scheduling, placement and routing have been performed offline (before runtime) due to their algorithmic complexity. However, with the increasing maturity of digital microfluidic research, online synthesis is becoming a realistic possibility that can bring new benefits in the areas of dynamic scheduling, control-flow, fault-tolerance and live-feedback. This paper contributes to the digital microfluidic synthesis process by introducing a fast, novel path-based scheduling algorithm that produces better schedules than list scheduler for assays with high fan-out; path scheduler computes schedules in milliseconds, making it suitable for both offline and online synthesis.
Keywords :
biology; lab-on-a-chip; medical computing; microfluidics; scheduling; algorithmic complexity; control-flow; digital microfluidic biochips; digital microfluidic research; digital microfluidic synthesis process; digital microfluidics; dynamic scheduling; fault-tolerance; list scheduler; live-feedback; path scheduling; path-based scheduling algorithm; Arrays; Electrodes; Microfluidics; Optimal scheduling; Processor scheduling; Proteins; Schedules; Digital Microfluidic Biochip (DMFB); Electrowetting-on-Dielectric (EWoD); Laboratory-on-Chip (LoC); Scheduling;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Design Automation Conference (DAC), 2012 49th ACM/EDAC/IEEE
Conference_Location :
San Francisco, CA
ISSN :
0738-100X
Print_ISBN :
978-1-4503-1199-1
Type :
conf
Filename :
6241486
Link To Document :
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