• DocumentCode
    565104
  • Title

    Path scheduling on digital microfluidic biochips

  • Author

    Grissom, Daniel ; Brisk, Philip

  • Author_Institution
    Dept. of Comput. Sci. & Eng., Univ. of California, Riverside, CA, USA
  • fYear
    2012
  • fDate
    3-7 June 2012
  • Firstpage
    26
  • Lastpage
    35
  • Abstract
    Since the inception of digital microfluidics, the synthesis problems of scheduling, placement and routing have been performed offline (before runtime) due to their algorithmic complexity. However, with the increasing maturity of digital microfluidic research, online synthesis is becoming a realistic possibility that can bring new benefits in the areas of dynamic scheduling, control-flow, fault-tolerance and live-feedback. This paper contributes to the digital microfluidic synthesis process by introducing a fast, novel path-based scheduling algorithm that produces better schedules than list scheduler for assays with high fan-out; path scheduler computes schedules in milliseconds, making it suitable for both offline and online synthesis.
  • Keywords
    biology; lab-on-a-chip; medical computing; microfluidics; scheduling; algorithmic complexity; control-flow; digital microfluidic biochips; digital microfluidic research; digital microfluidic synthesis process; digital microfluidics; dynamic scheduling; fault-tolerance; list scheduler; live-feedback; path scheduling; path-based scheduling algorithm; Arrays; Electrodes; Microfluidics; Optimal scheduling; Processor scheduling; Proteins; Schedules; Digital Microfluidic Biochip (DMFB); Electrowetting-on-Dielectric (EWoD); Laboratory-on-Chip (LoC); Scheduling;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Design Automation Conference (DAC), 2012 49th ACM/EDAC/IEEE
  • Conference_Location
    San Francisco, CA
  • ISSN
    0738-100X
  • Print_ISBN
    978-1-4503-1199-1
  • Type

    conf

  • Filename
    6241486