DocumentCode
565104
Title
Path scheduling on digital microfluidic biochips
Author
Grissom, Daniel ; Brisk, Philip
Author_Institution
Dept. of Comput. Sci. & Eng., Univ. of California, Riverside, CA, USA
fYear
2012
fDate
3-7 June 2012
Firstpage
26
Lastpage
35
Abstract
Since the inception of digital microfluidics, the synthesis problems of scheduling, placement and routing have been performed offline (before runtime) due to their algorithmic complexity. However, with the increasing maturity of digital microfluidic research, online synthesis is becoming a realistic possibility that can bring new benefits in the areas of dynamic scheduling, control-flow, fault-tolerance and live-feedback. This paper contributes to the digital microfluidic synthesis process by introducing a fast, novel path-based scheduling algorithm that produces better schedules than list scheduler for assays with high fan-out; path scheduler computes schedules in milliseconds, making it suitable for both offline and online synthesis.
Keywords
biology; lab-on-a-chip; medical computing; microfluidics; scheduling; algorithmic complexity; control-flow; digital microfluidic biochips; digital microfluidic research; digital microfluidic synthesis process; digital microfluidics; dynamic scheduling; fault-tolerance; list scheduler; live-feedback; path scheduling; path-based scheduling algorithm; Arrays; Electrodes; Microfluidics; Optimal scheduling; Processor scheduling; Proteins; Schedules; Digital Microfluidic Biochip (DMFB); Electrowetting-on-Dielectric (EWoD); Laboratory-on-Chip (LoC); Scheduling;
fLanguage
English
Publisher
ieee
Conference_Titel
Design Automation Conference (DAC), 2012 49th ACM/EDAC/IEEE
Conference_Location
San Francisco, CA
ISSN
0738-100X
Print_ISBN
978-1-4503-1199-1
Type
conf
Filename
6241486
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