DocumentCode
580104
Title
A massively parallel adaptive fast-multipole method on heterogeneous architectures
Author
Lashuk, I. ; Chandramowlishwaran, A. ; Langston, H. ; Tuan-Anh Nguyen ; Sampath, Rahul ; Shringarpure, A. ; Vuduc, Richard ; Lexing Ying ; Zorin, D. ; Biros, George
Author_Institution
Georgia Inst. of Technol., Atlanta, GA, USA
fYear
2009
fDate
14-20 Nov. 2009
Firstpage
1
Lastpage
12
Abstract
We present new scalable algorithms and a new implementation of our kernel-independent fast multipole method (Ying et al. ACM/IEEE SC ´03), in which we employ both distributed memory parallelism (via MPI) and shared memory/streaming parallelism (via GPU acceleration) to rapidly evaluate two-body non-oscillatory potentials. On traditional CPU-only systems, our implementation scales well up to 30 billion unknowns on 65K cores (AMD/CRAY-based Kraken system at NSF/NICS) for highly non-uniform point distributions. On GPU-enabled systems, we achieve 30x speedup for problems of up to 256 million points on 256 GPUs (Lincoln at NSF/NCSA) over a comparable CPU-only based implementations. We achieve scalability to such extreme core counts by adopting a new approach to scalable MPI-based tree construction and partitioning, and a new reduction algorithm for the evaluation phase. For the sub-components of the evaluation phase (the direct- and approximate-interactions, the target evaluation, and the source-to-multipole translations), we use NVIDIA´s CUDA framework for GPU acceleration to achieve excellent performance. To do so requires carefully constructed data structure transformations, which we describe in the paper and whose cost we show is minor. Taken together, these components show promise for ultrascalable FMM in the petascale era and beyond.
Keywords
Cray computers; distributed shared memory systems; graphics processing units; message passing; parallel architectures; AMD/CRAY-based Kraken system; CPU-only system; CUDA framework; GPU acceleration; GPU-enabled system; NSF/NICS; NVIDIA; data structure transformation; distributed memory parallelism; heterogeneous architecture; kernel-independent fast multipole method; massively parallel adaptive fast-multipole method; nonuniform point distribution; petascale era; reduction algorithm; scalable MPI-based tree construction; shared memory/streaming parallelism; source-to-multipole translation; two-body nonoscillatory potential; ultrascalable FMM;
fLanguage
English
Publisher
ieee
Conference_Titel
High Performance Computing Networking, Storage and Analysis, Proceedings of the Conference on
Conference_Location
Portland, OR
Type
conf
DOI
10.1145/1654059.1654118
Filename
6375552
Link To Document