DocumentCode :
617470
Title :
Automated spatial analysis of ARK2: Putative link between microtubules and cell polarity
Author :
Harlow, G. ; Cruz, Albert C. ; Li, Sinan ; Thakoor, N.S. ; Bianchi, A.C. ; Chen, Jiann-Jong ; Bhanu, Bir ; Yang, Zengli
Author_Institution :
Dept. of Botany & Plant Sci., Univ. of California, Riverside, Riverside, CA, USA
fYear :
2013
fDate :
7-11 April 2013
Firstpage :
910
Lastpage :
913
Abstract :
In leaves of A. thaliana, there exists an intricate network of epidermal surface layer cells responsible for anatomical stability and vigor of flexibility to the entire leaf. Rho GTPases direct this organization of cell polarity, but full understanding of the underlying mechanisms demands further inquiry. We conduct two experiments: (1) a novel procedure is proposed that could be used in other life and plant science studies to quantify microtubule orientation, and (2) shape analysis. We hypothesize ARK2 as a putative interactor in cell polarity maintenance through stabilization of microtubule ordering. We are the first to automate pavement cell phenotype analysis for cell polarity and microtubule orientation. Breakthroughs in the signaling network regulating leaf cell polarity and development will lead science into the frontier of genetically modifying leaves to dramatically increase Earth´s plant biomass; impending food shortages in the 21st century will be well served by such research.
Keywords :
biological techniques; biology computing; botany; cellular biophysics; enzymes; image denoising; molecular biophysics; A. thaliana leaves; ARK2; Earth plant biomass; Rho GTPases; anatomical stability; automated spatial analysis; cell phenotype analysis; cell polarity maintenance; epidermal surface layer cells; microtubule ordering; microtubule orientation; plant science; putative interactor; shape analysis; Educational institutions; Epidermis; Maintenance engineering; Manuals; Microscopy; Proteins; Shape; Image texture analysis; ROP GTPase signaling; cell polarity; image shape analysis; microtubulues;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Biomedical Imaging (ISBI), 2013 IEEE 10th International Symposium on
Conference_Location :
San Francisco, CA
ISSN :
1945-7928
Print_ISBN :
978-1-4673-6456-0
Type :
conf
DOI :
10.1109/ISBI.2013.6556623
Filename :
6556623
Link To Document :
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