DocumentCode
617823
Title
Replaying the tape of evolution: Evolving parameters for a simple bacterial metabolism
Author
Chu, Delin
Author_Institution
Sch. of Comput., Univ. of Kent, Canterbury, UK
fYear
2013
fDate
20-23 June 2013
Firstpage
213
Lastpage
220
Abstract
Parameter values of biological systems have received comparatively little attention in the past. Particularly computational modellers tend to see them as necessary, but often illusive pieces of information that somehow needs to be inferred. This article is a first attempt to understand whether quantitative information about biological systems, i.e. kinetic parameters, reaction rates, or other constants contain valuable information about the adaptive pressures for which they have evolved. To do this, genetic algorithms are used to evolve parameters for a fixed network structure. The results indicate that the parameters are rather specific to the particular circumstances for which they have evolved. If this is also true for real biological systems, then this suggests that parameter values may be a valuable source of biological information.
Keywords
biology; genetic algorithms; network theory (graphs); bacterial metabolism; biological information; biological systems; computational modellers; fixed network structure; genetic algorithms; kinetic parameters; reaction rates; Biochemistry; Biological system modeling; Biomass; Computational modeling; Mathematical model; Sociology; Statistics;
fLanguage
English
Publisher
ieee
Conference_Titel
Evolutionary Computation (CEC), 2013 IEEE Congress on
Conference_Location
Cancun
Print_ISBN
978-1-4799-0453-2
Electronic_ISBN
978-1-4799-0452-5
Type
conf
DOI
10.1109/CEC.2013.6557573
Filename
6557573
Link To Document