• DocumentCode
    617823
  • Title

    Replaying the tape of evolution: Evolving parameters for a simple bacterial metabolism

  • Author

    Chu, Delin

  • Author_Institution
    Sch. of Comput., Univ. of Kent, Canterbury, UK
  • fYear
    2013
  • fDate
    20-23 June 2013
  • Firstpage
    213
  • Lastpage
    220
  • Abstract
    Parameter values of biological systems have received comparatively little attention in the past. Particularly computational modellers tend to see them as necessary, but often illusive pieces of information that somehow needs to be inferred. This article is a first attempt to understand whether quantitative information about biological systems, i.e. kinetic parameters, reaction rates, or other constants contain valuable information about the adaptive pressures for which they have evolved. To do this, genetic algorithms are used to evolve parameters for a fixed network structure. The results indicate that the parameters are rather specific to the particular circumstances for which they have evolved. If this is also true for real biological systems, then this suggests that parameter values may be a valuable source of biological information.
  • Keywords
    biology; genetic algorithms; network theory (graphs); bacterial metabolism; biological information; biological systems; computational modellers; fixed network structure; genetic algorithms; kinetic parameters; reaction rates; Biochemistry; Biological system modeling; Biomass; Computational modeling; Mathematical model; Sociology; Statistics;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Evolutionary Computation (CEC), 2013 IEEE Congress on
  • Conference_Location
    Cancun
  • Print_ISBN
    978-1-4799-0453-2
  • Electronic_ISBN
    978-1-4799-0452-5
  • Type

    conf

  • DOI
    10.1109/CEC.2013.6557573
  • Filename
    6557573