• DocumentCode
    667218
  • Title

    Towards generalized nuclear segmentation in histological images

  • Author

    Vahadane, Abhishek ; Sethi, Ankit

  • Author_Institution
    Dept. of Electron. & Electr. Eng., Indian Inst. of Technol., Guwahati, Guwahati, India
  • fYear
    2013
  • fDate
    10-13 Nov. 2013
  • Firstpage
    1
  • Lastpage
    4
  • Abstract
    Computer aided diagnosis in cancer pathology (computational pathology) using histological images of biopsies is an emerging field. Segmentation of cell nuclei can be an important step in such image processing pipelines. Although seeded watershed segmentation is a simple and computationally efficient segmentation technique, it is prone to errors like over-segmentation when applied to histological images. We report specific enhancements to this technique to improve segmentation of cell nuclei in histological images. Foreground seeds were generated by fast radial symmetry transform (FRST). Otsu thresholding was used on enhanced image to estimate tentative foreground map. Background markers were computed from the tentative foreground map. False detections in the segmented output were removed by logical AND with the tentative foreground map. Using these enhancements nuclear segmentation was significantly improved on histological images (H&E stained breast and intestinal tissue images, Feulgen stained images of prostate tissues).
  • Keywords
    biological tissues; cancer; cellular biophysics; image enhancement; image segmentation; medical image processing; patient diagnosis; transforms; FRST; Feulgen stained images; H&E stained breast; Otsu thresholding; background markers; biopsy; cancer pathology; cell nuclei segmentation; computational pathology; computer aided diagnosis; false detections; fast radial symmetry transform; foreground seeds; histological images; image enhancement; image processing pipelines; intestinal tissue images; logical AND; nuclear segmentation; over-segmentation; prostate tissues; seeded watershed segmentation; segmentation technique; segmented output; tentative foreground map; Biomedical imaging; Cancer; Image segmentation; Microscopy; Shape; Smoothing methods; Transforms; histological images; seeded watershed segmentation; segmentation of cell nuclei;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Bioengineering (BIBE), 2013 IEEE 13th International Conference on
  • Conference_Location
    Chania
  • Type

    conf

  • DOI
    10.1109/BIBE.2013.6701556
  • Filename
    6701556