DocumentCode
667312
Title
Some results on topological colored motifs in metabolic networks
Author
Araujo, Ernesto ; Stefanes, Marco A.
Author_Institution
Fac. de Comput., Univ. Fed. de Mato Grosso do Sul, Dourados, Brazil
fYear
2013
fDate
10-13 Nov. 2013
Firstpage
1
Lastpage
5
Abstract
In this work, we address the topological colored motif search problem in metabolic networks. This problem is a concern in biology, which seeks to describe the functions and the evolution of metabolism. Recently, several variations of this problem have been studied. Here, we present some hardness results for finding motifs. Furthermore, we describe the first polynomial algorithm for the case in which the motif is a colorful tree. We also detail a data structure that allows finding all of these types of motifs in a metabolic network.
Keywords
data structures; evolution (biological); graph colouring; hardness; molecular biophysics; molecular configurations; polynomials; trees (mathematics); colorful tree; data structure; hardness; metabolic networks; metabolism evolution; polynomial algorithm; topological colored motifs; Biochemistry; Color; Data structures; Image color analysis; Polynomials; Search problems;
fLanguage
English
Publisher
ieee
Conference_Titel
Bioinformatics and Bioengineering (BIBE), 2013 IEEE 13th International Conference on
Conference_Location
Chania
Type
conf
DOI
10.1109/BIBE.2013.6701650
Filename
6701650
Link To Document