Title :
A Texture Feature Ranking Model for Predicting Survival Time of Brain Tumor Patients
Author :
Mu Zhou ; Hall, Lawrence O. ; Goldgof, Dmitry B. ; Gatenby, Robert A. ; Gillies, Robert J.
Author_Institution :
Dept. of Comput. Sci. & Eng., Univ. of South Florida, Tampa, FL, USA
Abstract :
Automated prediction of patient-specific disease progression can significantly contribute to clinical treatment. This paper presents a computer-assisted framework to tackle the survival time prediction problem. Inspired by the assumption that niche tumor regions may play a significant role in cancer diagnosis, we explore local visual variations from multiple MRI sequences. The research consists of three parts: 1) the extraction of multi-scale Local Binary Patterns (LBP) to describe the visual variations, 2) a supervised forward feature selection approach, called the Feature Ranking Model (FRM) which captures single feature predictive ability efficiently, and combines the top features to form a feature subset, 3) We cast the clinical survival time prediction task as a binary category classification problem. We tested the framework using a dataset of 32 cases collected from The Cancer Genome Atlas (TCGA). We obtained a 93.75% accuracy rate for the prediction of survival time.
Keywords :
biomedical MRI; brain; cancer; feature extraction; image classification; image sequences; image texture; medical image processing; patient treatment; prediction theory; tumours; FRM; MRI sequences; TCGA; The Cancer Genome Atlas; automated prediction; binary category classification problem; brain tumor patients; cancer diagnosis; clinical survival time prediction task; clinical treatment; computer-assisted framework; local visual variations; multiscale LBP extraction; multiscale local binary pattern extraction; niche tumor regions; patient-specific disease progression; single feature predictive ability; supervised forward feature selection approach; texture feature ranking model; Accuracy; Cancer; Feature extraction; Indexes; Magnetic resonance imaging; Tumors; Visualization; Brain tumor; Feature Selection; GBM; Local Binary Patterns; MRI; Ranking; Relief-F; Support Vector Machine; Survival time prediction; t-test;
Conference_Titel :
Systems, Man, and Cybernetics (SMC), 2013 IEEE International Conference on
Conference_Location :
Manchester
DOI :
10.1109/SMC.2013.771