• DocumentCode
    682446
  • Title

    Identification of crosstalk in Insulin pathway using Pathway Logic

  • Author

    Khan, Adnan Ahmed ; Ahmad, Jawad

  • Author_Institution
    Res. Center for Modeling & Simulation, NUST, Islamabad, Pakistan
  • fYear
    2013
  • fDate
    9-10 Dec. 2013
  • Firstpage
    1
  • Lastpage
    6
  • Abstract
    Signaling Pathways regulate several processes in cells. Analysis of these signaling pathways is difficult because the number of proteins/chemicals involved in signal transduction is enormous. Moreover presence of crosstalk makes these pathways so complex that analysis without some computational framework is very difficult. Knocking out/mutation of crosstalk may affect the regulation of some particular pathways. Pathway Logic (PL) provides a platform where biologist can model and query the signaling pathway using formal methods. First the known interactions in Insulin pathway are modeled using PL and then several crosstalk are identified.
  • Keywords
    Petri nets; biology computing; proteins; Petri net; chemicals; crosstalk identification; crosstalk mutation; formal methods; insulin pathway; pathway logic; proteins; signal transduction; signaling pathways; Analytical models; Chemicals; Computational modeling; Crosstalk; Insulin; Mathematical model; Proteins; Pathway Logic; Petri net; crosstalk; insulin; maude;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Emerging Technologies (ICET), 2013 IEEE 9th International Conference on
  • Conference_Location
    Islamabad
  • Print_ISBN
    978-1-4799-3456-0
  • Type

    conf

  • DOI
    10.1109/ICET.2013.6743529
  • Filename
    6743529