DocumentCode
692919
Title
Parallel design and performance of nested filtering factorization preconditioner
Author
Long Qu ; Grigori, Laura ; Nataf, Frederic
Author_Institution
Lab. de Rech. en Inf., Univ. Paris Sud 11, Orsay, France
fYear
2013
fDate
17-22 Nov. 2013
Firstpage
1
Lastpage
12
Abstract
We present the parallel design and performance of the nested filtering factorization preconditioner (NFF), which can be used for solving linear systems arising from the discretization of a system of PDEs on unstructured grids. NFF has limited memory requirements, and it is based on a two level recursive decomposition that exploits a nested block arrow structure of the input matrix, obtained priorly by using graph partitioning techniques. It also allows to preserve several directions of interest of the input matrix to alleviate the effect of low frequency modes on the convergence of iterative methods. For a boundary value problem with highly heterogeneous coefficients, discretized on three-dimensional grids with 64 millions unknowns and 447 millions nonzero entries, we show experimentally that NFF scales up to 2048 cores of Genci´s Bull system (Curie), and it is up to 2.6 times faster than the domain decomposition preconditioner Restricted Additive Schwarz implemented in PETSc.
Keywords
boundary-value problems; filtering theory; graph theory; iterative methods; linear algebra; mathematics computing; parallel processing; partial differential equations; Genci´s Bull system; NFF scales; PDE; PETSc; boundary value problem; domain decomposition preconditioner; graph partitioning techniques; heterogeneous coefficients; iterative methods; level recursive decomposition; linear systems; memory requirements; nested filtering factorization preconditioner performance; parallel design; restricted additive Schwarz; three-dimensional grids; unstructured grids; Approximation methods; Equations; Mathematical model; Matrix decomposition; Particle separators; Program processors; Vectors;
fLanguage
English
Publisher
ieee
Conference_Titel
High Performance Computing, Networking, Storage and Analysis (SC), 2013 International Conference for
Conference_Location
Denver, CO
Print_ISBN
978-1-4503-2378-9
Type
conf
DOI
10.1145/2503210.2503287
Filename
6877514
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