• DocumentCode
    692919
  • Title

    Parallel design and performance of nested filtering factorization preconditioner

  • Author

    Long Qu ; Grigori, Laura ; Nataf, Frederic

  • Author_Institution
    Lab. de Rech. en Inf., Univ. Paris Sud 11, Orsay, France
  • fYear
    2013
  • fDate
    17-22 Nov. 2013
  • Firstpage
    1
  • Lastpage
    12
  • Abstract
    We present the parallel design and performance of the nested filtering factorization preconditioner (NFF), which can be used for solving linear systems arising from the discretization of a system of PDEs on unstructured grids. NFF has limited memory requirements, and it is based on a two level recursive decomposition that exploits a nested block arrow structure of the input matrix, obtained priorly by using graph partitioning techniques. It also allows to preserve several directions of interest of the input matrix to alleviate the effect of low frequency modes on the convergence of iterative methods. For a boundary value problem with highly heterogeneous coefficients, discretized on three-dimensional grids with 64 millions unknowns and 447 millions nonzero entries, we show experimentally that NFF scales up to 2048 cores of Genci´s Bull system (Curie), and it is up to 2.6 times faster than the domain decomposition preconditioner Restricted Additive Schwarz implemented in PETSc.
  • Keywords
    boundary-value problems; filtering theory; graph theory; iterative methods; linear algebra; mathematics computing; parallel processing; partial differential equations; Genci´s Bull system; NFF scales; PDE; PETSc; boundary value problem; domain decomposition preconditioner; graph partitioning techniques; heterogeneous coefficients; iterative methods; level recursive decomposition; linear systems; memory requirements; nested filtering factorization preconditioner performance; parallel design; restricted additive Schwarz; three-dimensional grids; unstructured grids; Approximation methods; Equations; Mathematical model; Matrix decomposition; Particle separators; Program processors; Vectors;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    High Performance Computing, Networking, Storage and Analysis (SC), 2013 International Conference for
  • Conference_Location
    Denver, CO
  • Print_ISBN
    978-1-4503-2378-9
  • Type

    conf

  • DOI
    10.1145/2503210.2503287
  • Filename
    6877514