• DocumentCode
    703840
  • Title

    On-chip network-enabled many-core architectures for computational biology applications

  • Author

    Majumder, Turbo ; Pande, Partha Pratim ; Kalyanaraman, Ananth

  • Author_Institution
    Dept. of Electr. Eng., Indian Inst. of Technol. Delhi, New Delhi, India
  • fYear
    2015
  • fDate
    9-13 March 2015
  • Firstpage
    259
  • Lastpage
    264
  • Abstract
    Computational molecular biology applications are at the heart of the backend processing in cyber-physical systems when applied to domains such as drug discovery, personalized medicine and genetic disease risk assessment. These applications are characterized by the preponderance of data and computational complexity, and yet require reasonably fast processing in order to have any meaningful impact. As such, hardware acceleration for these applications have generated a lot of research interest. In this paper, we discuss the superiority of Network-on-Chip (NoC)-enabled many-core platforms over other conventional platforms in both the quantum of speedup achieved and the amount of energy consumed. We hence posit that research in NoC-enabled platforms for CPS applications will be a major enabler of future scientific and medical breakthroughs.
  • Keywords
    biology computing; multiprocessing systems; network-on-chip; NoC-enabled platforms; computational biology applications; computational molecular biology applications; cyber-physical systems; onchip network-enabled many-core architectures; Acceleration; Computer architecture; Field programmable gate arrays; Hardware; Kernel; Phylogeny; Topology;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Design, Automation & Test in Europe Conference & Exhibition (DATE), 2015
  • Conference_Location
    Grenoble
  • Print_ISBN
    978-3-9815-3704-8
  • Type

    conf

  • Filename
    7092392