DocumentCode :
706132
Title :
Retrieval accuracy of very large DNA-based databases of digital signals
Author :
Tsaftaris, Sotirios A. ; Katsaggelos, Aggelos K.
Author_Institution :
Dept. of Electr. Eng. & Comput. Sci., Northwestern Univ., Evanston, IL, USA
fYear :
2007
fDate :
3-7 Sept. 2007
Firstpage :
1561
Lastpage :
1565
Abstract :
In this paper a simulation of single query searches in very large DNA-based databases that are capable of storing and retrieving digital signals is presented. Similarly to the digital domain, a signal-to-noise ratio (SNR) measure to assess the performance of the DNA-based retrieval scheme in terms of database size and source statistics is defined. With approximations, it is shown that the SNR of any finite size DNA-based database is upper bounded by the SNR of an infinitely large one with the same source distribution. Computer simulations are presented to validate the theoretical outcomes.
Keywords :
biocomputing; digital signals; query processing; very large databases; DNA-based retrieval scheme; SNR; digital signal databases; retrieval accuracy; signal-to-noise ratio; single query searches; source statistics; very large DNA-based databases; Approximation methods; DNA; Databases; Europe; Mathematical model; Signal to noise ratio;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Signal Processing Conference, 2007 15th European
Conference_Location :
Poznan
Print_ISBN :
978-839-2134-04-6
Type :
conf
Filename :
7099068
Link To Document :
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