Title :
Deriving ADHD biomarkers with sparse coding based network analysis
Author :
Fangfei Ge ; Jinglei Lv ; Xintao Hu ; Bao Ge ; Lei Guo ; Junwei Han ; Tianming Liu
Author_Institution :
Sch. of Autom., Northwestern Polytech. Univ., Xi´an, China
Abstract :
Sparse coding has been increasingly used to explore brain networks using functional magnetic resonance imaging (fMRI). However, modeling and comparing brain network based on sparse coding is still challenging, especially in clinical applications. In this study, we propose a novel temporal sparse coding method to identify functional connectivity biomarkers in patients with Attention-Deficit/Hyperactivity Disorder (ADHD). Specifically, a group-wise temporal sparse coding method was proposed to localize corresponding brain regions of interest (ROIs) in rsfMRI data. The localized common ROIs were then used as brain network nodes for further functional connectivity analysis. By using a publicly available ADHD-200 dataset, we demonstrated that our method can identify functional connectivity biomarkers with improved performance in patient-healthy controls classification compared with the widely used independent component analysis (ICA).
Keywords :
biomedical MRI; medical computing; medical disorders; network theory (graphs); neurophysiology; ADHD biomarker derivation; ADHD-200 dataset; Attention-Deficit Hyperactivity Disorder; brain network nodes; brain networks; fMRI; functional connectivity analysis; functional connectivity biomarkers; functional magnetic resonance imaging; group wise temporal sparse coding method; localized common ROI; sparse coding based network analysis; Accuracy; Biomarkers; Brain modeling; Dictionaries; Encoding; Support vector machines; Training; ADHD; biomarkers; functional connectivity; resting-state fMRI; temporal sparse coding;
Conference_Titel :
Biomedical Imaging (ISBI), 2015 IEEE 12th International Symposium on
Conference_Location :
New York, NY
DOI :
10.1109/ISBI.2015.7163807