Title :
Gradient weighted CO-HOG for analysis of caudal vein structural changes in toxin exposed zebrafish embryo
Author :
Hans, C. ; McCollum, C. ; Bondesson, M. ; Shah, S. ; Merchant, F.
Author_Institution :
Dept. of Comput. Sci., Univ. of Houston, Houston, TX, USA
Abstract :
In this paper, we propose an approach to detect abnormalities in the vascular development of zebrafish embryos due to exposure to toxins. Morphological changes due to toxin exposure is modeled based on the proposed gradient weighted co-occurrence histogram of oriented gradients (gCo-HOG). These features are compared to more commonly used histogram of oriented gradients (HOG) features and Co-HOG features that utilizes spatial distribution of neighboring pixels to capture spatial structure. The features are used to train a linear SVM classifier to identify morphological changes in a dataset of zebrafish embryo images. Results show that proposed gCo-HOG based technique clearly outperforms HOG and Co-HOG features. The importance of descriptor lies in the fact that features are discriminative enough to capture subtle morphological changes between normal anatomy and toxin induced changes.
Keywords :
blood vessels; medical image processing; support vector machines; toxicology; caudal vein structural change analysis; gradient weighted CO-HOG; gradient weighted co-occurrence histogram of oriented gradients; linear SVM classifier; morphological change analysis; spatial distribution; toxin exposure; vascular development; zebrafish embryo; Embryo; Feature extraction; Head; Histograms; Image edge detection; Image segmentation; Shape;
Conference_Titel :
Biomedical Imaging (ISBI), 2015 IEEE 12th International Symposium on
Conference_Location :
New York, NY
DOI :
10.1109/ISBI.2015.7163926