Title :
Unsupervised Nosologic Imaging for Glioma Diagnosis
Author :
Yuqian Li ; Sima, D.M. ; Van Cauter, S. ; Himmelreich, U. ; Sava, A.R.C. ; Yiming Pi ; Yipeng Liu ; Van Huffel, Sabine
Author_Institution :
Sch. of Electron. Eng., Univ. of Sci. & Technol. of China, Chengdu, China
Abstract :
In this letter a novel approach to create nosologic images of the brain using magnetic resonance spectroscopic imaging (MRSI) data in an unsupervised way is presented. Different tissue patterns are identified from the MRSI data using nonnegative matrix factorization and are then coded as different primary colors (i.e. red, green, and blue) in an RGB image, so that mixed tissue regions are automatically visualized as mixtures of primary colors. The approach is useful in assisting glioma diagnosis, where several tissue patterns such as normal, tumor, and necrotic tissue can be present in the same voxel/spectrum. Error-maps based on linear least squares estimation are computed for each nosologic image to provide additional reliability information, which may help clinicians in decision making. Tests on in vivo MRSI data show the potential of this new approach.
Keywords :
biomedical MRI; brain; image coding; image colour analysis; medical image processing; neurophysiology; MRSI data; RGB image; glioma diagnosis; linear least squares estimation; magnetic resonance spectroscopic imaging; mixed tissue regions; necrotic tissue patterns; nonnegative matrix factorization; normal tissue patterns; nosologic brain images; primary colors; tumor tissue patterns; unsupervised nosologic imaging; Distribution functions; Graphical models; Image color analysis; Imaging; Presses; Standards; Tumors; Blind source separation (BSS); hierarchical nonnegative matrix factorization (hNMF); magnetic resonance spectroscopic imaging (MRSI); nonnegative matrix factorization (NMF); nosologic imaging; Brain; Brain Neoplasms; Databases, Factual; Glioma; Humans; Image Interpretation, Computer-Assisted; Least-Squares Analysis; Magnetic Resonance Spectroscopy; Neuroimaging; Reproducibility of Results;
Journal_Title :
Biomedical Engineering, IEEE Transactions on
DOI :
10.1109/TBME.2012.2228651