DocumentCode :
78666
Title :
A Statistical Modeling Approach for Tumor-Type Identification in Surgical Neuropathology Using Tissue Mass Spectrometry Imaging
Author :
Gholami, B. ; Norton, I. ; Eberlin, L.S. ; Agar, N.Y.R.
Author_Institution :
Dept. of Neurosurg., Harvard Med. Sch., Boston, MA, USA
Volume :
17
Issue :
3
fYear :
2013
fDate :
May-13
Firstpage :
734
Lastpage :
744
Abstract :
Current clinical practice involves classification of biopsied or resected tumor tissue based on a histopathological evaluation by a neuropathologist. In this paper, we propose a method for computer-aided histopathological evaluation using mass spectrometry imaging. Specifically, mass spectrometry imaging can be used to acquire the chemical composition of a tissue section and, hence, provides a framework to study the molecular composition of the sample while preserving the morphological features in the tissue. The proposed classification framework uses statistical modeling to identify the tumor type associated with a given sample. In addition, if the tumor type for a given tissue sample is unknown or there is a great degree of uncertainty associated with assigning the tumor type to one of the known tumor models, then the algorithm rejects the given sample without classification. Due to the modular nature of the proposed framework, new tumor models can be added without the need to retrain the algorithm on all existing tumor models.
Keywords :
biochemistry; diseases; feature extraction; mass spectroscopic chemical analysis; medical signal processing; neurophysiology; signal classification; statistical analysis; tumours; algorithm training; biopsied tumor tissue classification; classification framework; computer-aided histopathological evaluation; known tumor model; modular nature; neuropathologist; resected tumor tissue classification; sample molecular composition; sample rejection; statistical modeling approach; surgical neuropathology; tissue mass spectrometry imaging; tissue morphological feature; tissue section chemical composition; tumor type assignment uncertainty; tumor type identification; tumor-type identification; Brain models; Data models; Imaging; Ionization; Mass spectroscopy; Tumors; Classification; mass spectrometry (MS); neuropathology; statistical model;
fLanguage :
English
Journal_Title :
Biomedical and Health Informatics, IEEE Journal of
Publisher :
ieee
ISSN :
2168-2194
Type :
jour
DOI :
10.1109/JBHI.2013.2250983
Filename :
6473811
Link To Document :
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