Title :
An automated approach for analyzing D-periods in collagen fibril images
Author :
Gkoumplias, V. ; Zervakis, M. ; Tzaphlidou, M.
Author_Institution :
Dept. of Electron. & Comput. Eng., Tech. Univ. of Crete, Greece
fDate :
7/1/2005 12:00:00 AM
Abstract :
This paper considers an approach for analyzing fibrillar collagen structures based on fundamental concepts of pattern recognition. It focuses on the quantitative comparison between collagen structural data (electron-optical data) and chemical data. Theoretical models in the form of sequence-generated histograms are used as reference for extracting and analyzing the structural unit in images from collagen fibrils. In this respect, collagen provides a valuable model system for studying the chemical basis of ultrastructure, as well as detecting the alterations in collagen fibril structure produced by a disorder. Application examples are presented and the results are compared with biochemical studies.
Keywords :
biochemistry; biomedical optical imaging; electron microscopy; medical image processing; molecular biophysics; molecular configurations; pattern recognition; physiological models; proteins; skin; D-period analysis; biochemistry; collagen fibril images; collagen structure; electron-optics; pattern recognition; sequence-generated histograms; Amino acids; Biomedical engineering; Biomedical imaging; Bone diseases; Chemicals; Electron microscopy; Histograms; Image analysis; Sequences; Skin; Collagen images; Pearson´s; collagen structure; electron optical data; fibrillar protein; sequence-generated histogram; Algorithms; Amino Acid Sequence; Animals; Collagen Type I; Collagen Type III; Fibrillar Collagens; Image Interpretation, Computer-Assisted; Liver; Models, Chemical; Models, Molecular; Molecular Sequence Data; Rabbits; Rats; Sequence Analysis, Protein; Skin;
Journal_Title :
Biomedical Engineering, IEEE Transactions on
DOI :
10.1109/TBME.2005.847529