DocumentCode
9980
Title
Multi-scale approach for simulating time-delay biochemical reaction systems
Author
Yuanling Niu ; Burrage, Kevin ; Chengjian Zhang
Author_Institution
Sch. of Math. & Stat., Central South Univ., Changsha, China
Volume
9
Issue
1
fYear
2015
fDate
2 2015
Firstpage
31
Lastpage
38
Abstract
This study presents a multi-scale approach for simulating time-delay biochemical reaction systems when there are wide ranges of molecular numbers. The authors construct a new efficient approach based on partitioning into slow and fast subsets in conjunction with predictor-corrector methods. This multi-scale approach is shown to be much more efficient than existing methods such as the delay stochastic simulation algorithm and the modified next reaction method. Numerical testing on several important problems in systems biology confirms the accuracy and computational efficiency of this approach.
Keywords
biochemistry; biological techniques; delays; predictor-corrector methods; computational efficiency; delay stochastic simulation algorithm; method accuracy; modified next reaction method; multiscale approach; numerical testing; predictor-corrector methods; systems biology; time-delay biochemical reaction systems;
fLanguage
English
Journal_Title
Systems Biology, IET
Publisher
iet
ISSN
1751-8849
Type
jour
DOI
10.1049/iet-syb.2013.0023
Filename
7005037
Link To Document